Package: syntenyPlotteR
Type: Package
Title: Genome Synteny Visualization
Version: 1.0.0
Authors@R: 
    c(person("Marta", "Farre", email = "m.farre-belmonte@kent.ac.uk", role = c("aut", "cre", "cph")), 
    person("Sarah", "Quigley", email = "slq4@kent.ac.uk", role = "aut"), 
    person("Joana", "Damas", email = "joanadamas@gmail.com", role = "aut"), 
    person("Denis", "Larkin", email = "dlarkin@rvc.ac.uk", role = "aut"))
Maintainer: Marta Farre <m.farre-belmonte@kent.ac.uk>
Description: Draw syntenic relationships between genome assemblies.
    There are 3 functions which take a tab delimited file containing alignment data for 
    syntenic blocks between genomes to produce either a linear alignment plot, 
    an evolution highway style plot, or a painted ideogram representing syntenic relationships.
    There is also a function to convert alignment data in the DESCHRAMBLER/inferCAR format
    to the required data structure.
Encoding: UTF-8
RoxygenNote: 7.2.3.9000
Imports: ggplot2, stringr, utils
NeedsCompilation: no
BugReports: https://github.com/Farre-lab/syntenyPlotteR/issues
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
License: MIT + file LICENSE
Packaged: 2023-10-03 12:39:08 UTC; Sarah
Author: Marta Farre [aut, cre, cph],
  Sarah Quigley [aut],
  Joana Damas [aut],
  Denis Larkin [aut]
Repository: CRAN
Date/Publication: 2023-10-03 16:50:02 UTC
Built: R 4.4.3; ; 2026-03-27 20:26:43 UTC; windows
