* using log directory 'd:/Rcompile/CRANpkg/local/4.5/BiocManager.Rcheck' * using R version 4.5.3 (2026-03-11 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'BiocManager/DESCRIPTION' ... OK * this is package 'BiocManager' version '1.30.27' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'BiocManager' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [1s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [6s] ERROR Running 'testthat.R' [6s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(BiocManager) Bioconductor version '3.22' is out-of-date; the current release version '3.23' is available with R version '4.6'; see https://bioconductor.org/install > > test_check("BiocManager") Saving _problems/test_version-307.R Saving _problems/test_version-311.R [ FAIL 2 | WARN 2 | SKIP 25 | PASS 91 ] ══ Skipped tests (25) ══════════════════════════════════════════════════════════ • On CRAN (24): 'test_install.R:27:5', 'test_install.R:45:5', 'test_install.R:219:5', 'test_repositories.R:5:5', 'test_repositories.R:14:5', 'test_repositories.R:20:5', 'test_repositories.R:26:5', 'test_repositories.R:80:5', 'test_repositories.R:90:5', 'test_repositories.R:164:5', 'test_repositories.R:173:5', 'test_repositories.R:211:5', 'test_version.R:17:5', 'test_version.R:39:5', 'test_version.R:92:5', 'test_version.R:107:5', 'test_version.R:147:5', 'test_version.R:194:5', 'test_version.R:235:5', 'test_version.R:246:5', 'test_version.R:277:5', 'test_version.R:328:5', 'test_version.R:387:5', 'test_version.R:428:5' • too idiosyncratic for standardized testing (1): 'test_install.R:179:5' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_version.R:307:5'): .version_map_get() falls back to http ───── Expected `length(msgs)` to be identical to 2L. Differences: 1/1 mismatches [1] 1 - 2 == -1 ── Failure ('test_version.R:311:5'): .version_map_get() falls back to http ───── Expected `sum(grepl("http://httpbin.org", msgs))` to be identical to 1L. Differences: 1/1 mismatches [1] 0 - 1 == -1 [ FAIL 2 | WARN 2 | SKIP 25 | PASS 91 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [5s] OK * checking PDF version of manual ... [16s] OK * checking HTML version of manual ... [2s] OK * DONE Status: 1 ERROR