* using log directory 'd:/Rcompile/CRANpkg/local/4.5/SIRthresholded.Rcheck' * using R version 4.5.3 (2026-03-11 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'SIRthresholded/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'SIRthresholded' version '1.0.2' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'SIRthresholded' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking R/sysdata.rda ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [5s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [23s] ERROR Error(s) in re-building vignettes: --- re-building 'SIRthresholded.Rmd' using rmarkdown Quitting from SIRthresholded.Rmd:378-391 [unnamed-chunk-26] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `file()`: ! cannot open the connection to 'https://gist.githubusercontent.com/Clement-W/26d99a28ab89929b6321f70a04535451/raw/169a36568d1fc7c5a7c508e8d3e720d5040744cd/wine.csv' --- Backtrace: ▆ 1. └─utils::read.csv(...) 2. └─utils::read.table(...) 3. └─base::file(file, "rt") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'SIRthresholded.Rmd' failed with diagnostics: cannot open the connection to 'https://gist.githubusercontent.com/Clement-W/26d99a28ab89929b6321f70a04535451/raw/169a36568d1fc7c5a7c508e8d3e720d5040744cd/wine.csv' --- failed re-building 'SIRthresholded.Rmd' SUMMARY: processing the following file failed: 'SIRthresholded.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [16s] OK * checking HTML version of manual ... [3s] OK * DONE Status: 1 ERROR