* using log directory 'd:/Rcompile/CRANpkg/local/4.5/casebase.Rcheck' * using R version 4.5.3 (2026-03-11 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'casebase/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'casebase' version '0.10.6' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'casebase' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [5s] OK * checking whether the package can be loaded with stated dependencies ... [4s] OK * checking whether the package can be unloaded cleanly ... [4s] OK * checking whether the namespace can be loaded with stated dependencies ... [4s] OK * checking whether the namespace can be unloaded cleanly ... [5s] OK * checking loading without being on the library search path ... [4s] OK * checking whether startup messages can be suppressed ... [5s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [15s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [16s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [56s] OK Running 'testthat.R' [56s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [143s] ERROR Error(s) in re-building vignettes: --- re-building 'competingRisk.Rmd' using rmarkdown --- finished re-building 'competingRisk.Rmd' --- re-building 'customizingpopTime.Rmd' using rmarkdown --- finished re-building 'customizingpopTime.Rmd' --- re-building 'plotabsRisk.Rmd' using rmarkdown --- finished re-building 'plotabsRisk.Rmd' --- re-building 'plotsmoothHazard.Rmd' using rmarkdown Quitting from plotsmoothHazard.Rmd:68-81 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `plot()`: ! `...` must be empty. ✖ Problematic arguments: • print.cond = TRUE • main = "No Hormonal Therapy Hazard Function" --- Backtrace: ▆ 1. ├─base::plot(...) 2. └─casebase:::plot.singleEventCB(...) 3. ├─base::do.call(...) 4. └─visreg (local) ``(...) 5. └─visreg:::finalize_visreg(v, plot, ...) 6. ├─base::plot(v, ...) 7. └─visreg:::plot.visreg(v, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'plotsmoothHazard.Rmd' failed with diagnostics: `...` must be empty. ✖ Problematic arguments: • print.cond = TRUE • main = "No Hormonal Therapy Hazard Function" --- failed re-building 'plotsmoothHazard.Rmd' --- re-building 'popTime.Rmd' using rmarkdown --- finished re-building 'popTime.Rmd' --- re-building 'smoothHazard.Rmd' using rmarkdown Quitting from smoothHazard.Rmd:121-125 [unnamed-chunk-9] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `FUN()`: ! `...` must be empty. ✖ Problematic argument: • print.cond = TRUE --- Backtrace: ▆ 1. ├─base::plot(model4, hazard.params = list(alpha = 0.05)) 2. └─casebase:::plot.singleEventCB(model4, hazard.params = list(alpha = 0.05)) 3. ├─base::do.call(...) 4. └─visreg (local) ``(...) 5. └─visreg:::finalize_visreg(v, plot, ...) 6. ├─base::plot(v, ...) 7. └─visreg:::plot.visreg_list(v, ...) 8. ├─base::structure(...) 9. └─base::lapply(x, plot, ...) 10. ├─base (local) FUN(X[[i]], ...) 11. └─visreg:::plot.visreg(X[[i]], ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'smoothHazard.Rmd' failed with diagnostics: `...` must be empty. ✖ Problematic argument: • print.cond = TRUE --- failed re-building 'smoothHazard.Rmd' --- re-building 'time-varying-covariates.Rmd' using rmarkdown --- finished re-building 'time-varying-covariates.Rmd' SUMMARY: processing the following files failed: 'plotsmoothHazard.Rmd' 'smoothHazard.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... [4s] OK * DONE Status: 1 ERROR