* using log directory 'd:/Rcompile/CRANpkg/local/4.6/biotools.Rcheck' * using R version 4.6.1 (2026-06-24 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-08-12 17:34:29 UTC * checking for file 'biotools/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'biotools' version '4.3' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'biotools' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [0s] OK * checking loading without being on the library search path ... [1s] OK * checking whether startup messages can be suppressed ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [7s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [3s] OK * checking PDF version of manual ... [20s] OK * checking HTML version of manual ... [9s] OK * DONE Status: OK Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: [1] Vienna > euro$distClust cluster 1 cluster 2 cluster 3 cluster 4 cluster 5 cluster 6 cluster 1 689.400 1337.3333 1324.545 2071.00 2053.045 1127.273 cluster 2 1337.333 686.3333 2498.000 3142.00 2781.333 1571.667 cluster 3 1324.545 2498.0000 636.000 960.75 2704.750 2105.500 cluster 4 2071.000 3142.0000 960.750 676.00 3587.000 2955.500 cluster 5 2053.045 2781.3333 2704.750 3587.00 817.000 1600.000 cluster 6 1127.273 1571.6667 2105.500 2955.50 1600.000 0.000 > > # End (not run) > > > > ### *