* using log directory 'd:/Rcompile/CRANpkg/local/4.6/mmconvert.Rcheck' * using R version 4.6.1 (2026-06-24 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-08-12 18:59:30 UTC * checking for file 'mmconvert/DESCRIPTION' ... OK * this is package 'mmconvert' version '0.14' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'mmconvert' can be installed ... OK * used C++ compiler: 'g++.exe (GCC) 14.3.0' * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s] OK * checking whether the package can be loaded with stated dependencies ... [0s] OK * checking whether the package can be unloaded cleanly ... [0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s] OK * checking whether the namespace can be unloaded cleanly ... [1s] OK * checking loading without being on the library search path ... [0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s] OK * checking Rd files ... [0s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compiled code ... OK * checking examples ... [1s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [2s] OK Running 'testthat.R' [2s] * checking PDF version of manual ... [18s] OK * checking HTML version of manual ... [2s] OK * DONE Status: OK Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: > > # input can also be in Mbp > input_df$pos <- input_df$pos / 1e6 > mmconvert(input_df, input_type="Mbp") marker chr cM_coxV3_ave cM_coxV3_female cM_coxV3_male rs13482072 rs13482072 14 0.3938878 0.4204617 0.3707116 rs13482231 rs13482231 14 28.7007118 34.8398609 22.8635376 gnf14.117.278 gnf14.117.278 14 59.5630160 64.5897950 55.0750080 bp_grcm39 Mbp_grcm39 rs13482072 6738536 6.738536 rs13482231 67215850 67.215850 gnf14.117.278 121955310 121.955310 > > > > ### *