* using log directory 'd:/Rcompile/CRANpkg/local/4.6/speaq.Rcheck' * using R version 4.6.1 (2026-06-24 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-08-12 15:07:33 UTC * checking for file 'speaq/DESCRIPTION' ... OK * this is package 'speaq' version '2.7.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'speaq' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [3s] OK * checking whether the package can be loaded with stated dependencies ... [3s] OK * checking whether the package can be unloaded cleanly ... [3s] OK * checking whether the namespace can be loaded with stated dependencies ... [3s] OK * checking whether the namespace can be unloaded cleanly ... [3s] OK * checking loading without being on the library search path ... [3s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [13s] OK * checking Rd files ... [1s] NOTE checkRd: (-1) findRef.Rd:39: Lost braces 39 | Vu TN, Valkenborg D, Smets K, Verwaest KA, Dommisse R, Lemi\`{e}re F, Verschoren A, Goethals B, Laukens K. (2011) An integrated workflow for robust alignment and simplified quantitative analysis of NMR spectrometry data. BMC Bioinformatics. 2011 Oct 20;12:405. | ^ checkRd: (-1) hClustAlign.Rd:70: Lost braces 70 | Vu TN, Valkenborg D, Smets K, Verwaest KA, Dommisse R, Lemi\`{e}re F, Verschoren A, Goethals B, Laukens K. (2011) An integrated workflow for robust alignment and simplified quantitative analysis of NMR spectrometry data. BMC Bioinformatics. 2011 Oct 20;12:405. | ^ * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... [0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [70s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [189s] OK * checking PDF version of manual ... [26s] OK * checking HTML version of manual ... [7s] OK * DONE Status: 1 NOTE Check process probably crashed or hung up for 20 minutes ... killed Most likely this happened in the example checks (?), if not, ignore the following last lines of example output: [145] 461 464 466 471 476 479 482 486 488 492 500 511 520 528 531 533 536 538 [163] 540 545 548 550 557 563 566 568 570 574 579 583 585 587 589 591 593 595 [181] 597 600 602 604 607 609 612 616 619 624 627 630 632 634 637 639 642 645 [199] 647 651 653 655 658 661 663 665 667 669 672 675 678 681 685 689 693 696 [217] 699 705 707 710 714 717 719 721 723 725 727 729 731 733 735 737 742 744 [235] 749 752 755 758 761 763 767 771 773 776 780 782 784 788 793 796 799 803 [253] 805 808 810 815 817 821 823 826 829 832 834 837 839 842 844 847 850 854 [271] 858 862 865 867 869 872 874 877 879 883 885 889 892 894 900 902 906 908 [289] 911 913 916 919 923 926 930 932 935 937 941 944 946 948 950 952 955 959 [307] 962 964 967 970 972 975 980 982 986 989 992 994 998 > > > > > ### *